ProfileAutoimmune Diseases
Anti – Cardiolipin  (IgG,IgM) 
   Anti – β2 glycoprotein  I (IgG,IgM) , Lupus anti coagulant antibodies
Anti -phospholipid syndrome
ANA,Anti- SMA,Anti- LKM-1 ,ANCA Immune globulins,
Anti- mitochondrial antibodies
Autoimmune hepatitis
AMA,ANA,Anti-SS-A(RO), Anti-SMA 
                Anti-centromere (ACA)
Primary biliary cirrhosis
P-ANCA , ANAPrimary sclerosing cholangitis
Anti- endomysial ( IgA, IgG), Anti-tissue transglutaminase ( IgA, IgG)
  Anti-gliadin (DGP) ( IgA, IgG)
Celiac disease
Anti- endomysial ( IgA, IgG),
Anti- tissue transglutaminase Ab( IgA, IgG)
     Anti-gliadin (DGP) ( IgA, IgG)
Dermatitis herpetiformis
ANCA –ASCA (IgG,IgA)- Calprotectin in stoolInflamatory bowel disease ( IBD) (Ulcerative  colitis ,chron’s disease )
HLA-B51,( HLA B27)Behcet’s disease (Immune-mediated Systemic  Vasculitis)
Anti-Glutamic acid decarboxylase (GADA) – Anti Islet cell(ICA)*Diabetes mellitus type 1
Anti-parietal cell antibodies (APCA) Anti-intrinsic factor antibodies*Pernicious anemia
Anti-glomerular Basement Membrane (GBM) , ANCA (P- C)Good pasture’s syndrome / Nephritis
Thyroid Autoantibodies (Anti TSHR- Anti TPO-Anti Tg)Thyroid diseases ( AITD) (Graves- Hashimoto’s Thyroiditis)
ANA, AMA,Anti-Cardiolipin 
    Anti-dsDNA, ENA, Immune globulins
Collagen diseases
ANA,Anti-ds-DNA (nucleosome), C1q , CIC, Anti C1q*,  Anti-histone* , Anti- phospholipid, Anti- B2-glycoprotein, Anti-Cardiolipin (IgG,IgM) Anti – SS-A (RO), SS-B(La), Anti-Sm , Anti-U1-snRNPLupus erythematosus
ANA, anti-U1-snRNPMixed connective Tissue disease
Anti-Acetylcholin  receptor ,Anti-Musk Myasthenia gravis
ANA, anti-jo 1, anti- U1- snRNP, Anti-SSA (RO)Myositis (Dermatomyositis,polymyositis)
Anti-Aquaporin- 4 ( NMO- IgG )Neuromeylitis optica (Devic’s syndrome)
Anti-PLA2R (phospholipase A2 receptor )Primary membraneous glomerulonephritis (PMGN) (Idiopathic)
Anti-MCV, Anti-CCP (cyclic citrulinated peptide), Rheumatoid factor (IgGFc)Rheumatoid arthritis
Anti-centromere-ANA-Anti-SCL-70CREST syndrome
Anti – Scl-70, ANA, Anti-Centromere, Anti – U1- snPNPScleroderma
Anti – SS-A(RO),Anti – SS-B(La), Anti- ds-DNA, Anti – U1-snRNPSjongren Syndrome
Sometimes ANCA-Anti-MPO, PR3Vasculitis (PAN, MPA, CSS,…)
C-ANCA  Anti- MPO(meyeloperoxidase) Anti- PR3 (proteinase 3)Wegener’S granulomatosis